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GST

Inverted Duty Structure Refund Under GST

When inputs carry more GST than your output, credit piles up. See who can claim an inverted duty refund, how Rule 89(5) works, and how to file RFD-01.

Ankush GoyalReviewed by Rahul Jangra

9 Oct 2026Updated 9 Oct 20266 min read

Inverted duty structure

An inverted duty structure refund lets a registered person recover input tax credit (ITC) that accumulates because the GST rate on inputs is higher than on the output supply. It is allowed by Section 54(3)(ii) of the CGST Act and calculated with the formula in Rule 89(5): only credit on inputs (goods) counts, not input services or capital goods. The claim is filed in RFD-01 within two years of the relevant date.

For claims filed from 1 October 2025, low-risk inverted duty claims can also receive 90% as a provisional refund, a facility earlier limited to exporters.

Inverted duty refund at a glance

Point

Position

Legal basis

Section 54(3)(ii), CGST Act; formula in Rule 89(5), CGST Rules

Eligible credit

ITC on inputs only; input services and capital goods excluded from Net ITC

Formula

(Inverted turnover × Net ITC ÷ Adjusted total turnover) − (Tax on inverted turnover × Net ITC ÷ ITC on inputs and input services)

Form

RFD-01 with Statements 1 and 1A

Time limit

Two years from the relevant date: the due date of the return for the period of the claim

Provisional refund

90% for low-risk claims filed from 1 October 2025 (CBIC Instruction No. 06/2025-GST)

Not allowed

Notified goods and services; cases where input and output are the same goods

When does an inverted duty structure arise?

Credit accumulates when you buy inputs at a higher rate than you sell your product. Example: a manufacturer buys raw materials and packing at 18% and sells finished goods taxed at 5%. Every month, credit on the inputs exceeds the tax on sales, and the unused balance grows in the credit ledger.

The GST 2.0 rate changes of 22 September 2025, which moved most goods into 5% and 18% slabs, removed inversion for some products and created it for others. Check the current rate of both your inputs and your outputs before assuming a refund position still exists, or no longer exists.

Who cannot claim an inverted duty refund

Situation

Why

Output supplies are nil-rated or fully exempt

No taxable output, so there is no inverted-rated supply

Input and output are the same goods

Rate differences on the same goods do not create an inverted structure (Circular 135/05/2020-GST)

Goods or services notified under Section 54(3)

The government has barred refunds for specific items

Credit arising only from input services or capital goods

Excluded from Net ITC in the formula, as upheld by the Supreme Court in VKC Footsteps (2021)

How the Rule 89(5) formula works

Rule 89(5), as amended by Notification No. 14/2022-Central Tax dated 5 July 2022, gives the maximum refund:

Maximum refund = (Turnover of inverted-rated supply × Net ITC ÷ Adjusted total turnover) − (Tax payable on inverted-rated supply × Net ITC ÷ ITC availed on inputs and input services)

Net ITC is credit on inputs only. The second part deducts only the share of output tax treated as paid from input credit, rather than the whole output tax that the formula deducted before the 2022 amendment.

Example: a manufacturer in Bahadurgarh sells finished goods taxed at 5% during a month. Figures for the period:

Item

Amount

Turnover of inverted-rated supply (all sales)

₹1,00,00,000

Adjusted total turnover

₹1,00,00,000

ITC on inputs (Net ITC)

₹14,00,000

ITC on input services

₹1,00,000

ITC on inputs and input services

₹15,00,000

Tax payable on inverted-rated supply at 5%

₹5,00,000

First part: ₹1 crore × ₹14 lakh ÷ ₹1 crore

₹14,00,000

Second part: ₹5 lakh × ₹14 lakh ÷ ₹15 lakh

₹4,66,667

Maximum refund

₹9,33,333

As with export refunds, the amount claimed is limited to the lowest of the formula result, the credit ledger balance at the end of the period and the balance on the date of filing.

Time limit for filing the claim

Section 54(1) allows two years from the relevant date. For inverted duty refunds, the relevant date is the due date for furnishing the GSTR-3B for the period in which the claim arises. A claim for a month whose GSTR-3B was due on 20 June 2025 must therefore be filed by 20 June 2027.

Our view: file inverted duty claims monthly or quarterly as the credit builds, not once a year. Smaller, regular claims are easier to verify, keep each period well inside the two-year limit, and return working capital sooner.

How to file the refund in RFD-01

  1. Reconcile the period's inward invoices with GSTR-2B and separate input, input-service and capital-goods credit.

  2. Go to Services > Refunds > Application for Refund on the GST portal.

  3. Select Refund of ITC accumulated due to Inverted Tax Structure and the period.

  4. Fill Statement 1 with the formula figures and Statement 1A with invoice-wise inward and outward details.

  5. Upload supporting documents and enter the refund amount within the permitted limit.

  6. Submit with DSC or EVC; the claimed amount is debited from the credit ledger.

  7. Track the ARN for RFD-02 acknowledgement, any RFD-03 deficiency memo and the orders.

The GSTN's refund user manual shows each screen of the application.

Provisional refund and processing timelines

The 56th GST Council meeting recommended extending the 90% provisional refund to inverted duty claims, and CBIC Instruction No. 06/2025-GST, dated 3 October 2025, applied it as an interim measure to claims filed on or after 1 October 2025. The system assesses risk; low-risk claims receive 90% provisionally, and the officer then completes the final order.

Stage

Timeline

Acknowledgement or deficiency memo

Within 15 days of filing

Provisional refund, where eligible

90% of the claim, soon after acknowledgement

Final order (RFD-06)

Within 60 days of the complete application

Interest on delay

6% a year beyond 60 days (Section 56)

Records that make the claim hold up

Record

Why the officer asks for it

Rate-wise sales register

Shows which supplies are inverted-rated

Inward register split by inputs, input services and capital goods

Supports the Net ITC figure

GSTR-2B for the period

Confirms the credit is reflected and eligible

Bill of materials or production records

Shows the inputs are used in the inverted-rated output

GSTR-3B and GSTR-1 for the period

Turnover and tax figures must match the claim

A cash ledger balance follows a different route; see refund of excess cash ledger balance. Exporters should read GST refund on export of services instead.

Credit piling up month after month? Talk to Ankush's team about GST refund services at ComplyLocal →

Frequently Asked Questions

  • It is a situation where the GST rate on inputs is higher than the rate on the output supply, for example raw materials bought at 18% and finished goods sold at 5%. Input tax credit then accumulates faster than it can be used, and Section 54(3)(ii) allows a refund.

  • No. Rule 89(5) defines Net ITC as credit on inputs only, and the Supreme Court upheld this in VKC Footsteps (2021). Credit on input services and capital goods is not refunded, though it can still be used to pay output tax.

  • Two years from the relevant date under Section 54(1). For inverted duty claims, the relevant date is the due date of the GSTR-3B for the period in which the claim arises.

  • Yes, for claims filed on or after 1 October 2025. Under CBIC Instruction No. 06/2025-GST, low-risk inverted duty claims, as assessed by the system, can receive 90% of the amount claimed provisionally, as exporters already could.

  • No. Circular 135/05/2020-GST clarifies that where the input and output supplies are the same goods, a difference in rates does not create an inverted duty structure eligible for refund.

  • Form GST RFD-01, filed online under the category Refund of ITC accumulated due to Inverted Tax Structure, with Statement 1 for the formula and Statement 1A for invoice-wise details.

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Written by

Ankush Goyal

Head of GST Department

Ankush Goyal is the Head of the GST Department at ComplyLocal Consultants, specializing in GST registration, amendments, return filing, notices, refunds, e-invoicing, e-way bills, and end-to-end GST compliance for businesses across India.

Reviewed for accuracy by

Rahul Jangra

Senior SEO Specialist - Complylocal Consultants

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